** Attributes **

   contact:   d e r i j k p at u i a dot u a dot a c dot b e


** Projects **


*** Bioinformatics projects ***

I work in Bioinformatics and have made several applications in this field, that
include a great deal of Tcl:

   [http://genomecomb.sourceforge.net/%|%GenomeComb]:   a package designed for the analysis of complete genome data. It can be used to compare, annotate and especially filter the results of complete genome sequencing

   [http://www.molgen.ua.ac.be/bioinfo/novosnp/%|%novoSNP]:   finding SNPs and indels in resequencing projects

   [http://rnaviz.sourceforge.net/%|%RnaViz]:   for drawing RNA secundary structure models

   [http://rrna.cde.ua.ac.be/dcse/%|%DCSE]:   multiple sequence alignment editor with structure information

Some as yet unreleased work or in progress

   pedviewer:   a tool for managing and analysing large pedigrees

   biotcl:   

I also wrote some internal applications (that will probably not be released)
includes

   a LIMS system using tclhttpd:   

   pac:   automated analysis of STR genotyping

*** Other Projects ***


I produced several extensions to Tcl:

   [Extral]:   extra commands for Tcl

   [ClassyTcl] and [ClassyTk]:   object system, extra widgets, builder and some applications

   [http://tcl-dbi.sourceforge.net/interface/%|%interface]:   Tcl extension for defining interfaces 

   [TclDBI]:   generic database access api

   [http://rrna.cde.ua.ac.be/tclcompress/%|%tclCompress]:   compress data in Tcl

   [http://rrna.cde.ua.ac.be/tcldbm%|%tcldbm]:   dbm access from Tcl 

and am still experimenting with some

   opaque:   using Tcl_Objects from Tcl

Also working on applications outside of bio

   lights:   an interface to the darcs versioning system


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